ai-sandbox

A collection of AI resources, guides, and brainstorming space for the lab.

What's Here

ai-sandbox/
├── agents/           # Agent examples
├── commands/         # Custom slash commands (organized by user)
├── skills/           # Skill definitions (organized by user)
├── workspaces/       # Multi-repo project workspaces
│   ├── workspace.py  # Setup script for workspaces
│   └── <name>/       # Individual workspace (e.g. refgenie)
│       ├── .claude/  # Shared AI config (tracked)
│       ├── plans/    # Cross-repo plans and docs
│       └── repos/    # Cloned git repos (gitignored)
└── resources/        # Guides, ideas, and references
    ├── guides/       # How-to guides for AI tools
    ├── ideas/        # Brainstorming space
    └── links.md      # Curated external links

Getting Started

New to AI tools? Start here:

Getting Started - Install and configure Claude Code
Configuration - .claude/ directory and CLAUDE.md
Workflows - Common ways to use it
Commands - Built-in slash commands
Skills - Task-oriented capabilities
Agents - How Claude handles complex tasks
Tips & Tricks - Power user features

Contributing Ideas

Have an idea for how AI could help with lab work? Add it to resources/ideas/proposed/ using the idea template.

Resources

See resources/links.md for curated external links.

Name	analysis-report
Description	Write data analysis reports where all quantitative information appears in programmatically-generated plots, never in hand-written text tables. Prevents AI from fabricating numbers by ensuring all values come from computed data rendered visually. Use when creating analysis reports, generating summary statistics, or presenting correlation/comparison results.

analysis-report

SKILL.md

ai-sandbox

What's Here

Getting Started

Contributing Ideas

Resources